Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902892.1_cds_XP_016452901.1_47081
CDS Infomation

[gene=LOC107777406] [db_xref=GeneID:107777406] [protein=AAA-ATPase At3g50940-like] [protein_id=XP_016452901.1] [location=join(7486..8463,8816..9295)] [gbkey=CDS]
Sequence

ATGGCTCCTGAATTAGATATGGCTAATGTTAAAGCTGTTGTCTCTACTGTTGCCTCTGTT
GCTGCTACAGCAATGCTAGTTCGTAGCATAGCAAATGATTTCATTCCAAAAGAATTCCGA
AGCTACATTTTTGACAGCTTCCCCGATATCTTTCGTCGTTTCTCTTCTCAATTCACCGTT
CTTATCCATGAATTTCAAGGACCATCCCCGAACCTGGTGTTCGAGGCAGTAGAAGTTTAT
TTAGGAACCATAGCGAACTCTTCAGCTAAAAGTATTCGATTAGGGAAGACTGAGAATGAC
AAGAATCTTGTCATTACAATGGACAAAGACGAAGAGATAATCGATGTTTTTGAGAATATT
AAGGTAACATGGAGAATGGAGTGTAGACGTATCGAGTCAGGTAGCCAGAACGACGAGATA
AAAGATATGATTGCTGCATTAAGTTCTGAACTTAGATGTTATGAGCTGAGTTTTCACAAG
AAACACAAGGAAATGGTAATGAAATCGTATTTGCCTTACATTATGGAAAGATCAAAGGCA
ACGAAAGAAGAATCCAGGGCTATAAAATTGTATTCAAATTTCAGAAACTGGGGTTCTGAT
GGTATGAATCTTGAACATCCTATGACATTTGACACTCTGGCTATGGAGGAAGAGATCAAG
AACGTGCTAATTGATGACTTGGCCAGTTTTGTTAAGGGGAAAGAGTACTACAACCGGATT
GGGAAAGCTTGGAAACGAGGCTATTTGTTATATGGTCCTCCTGGAACTGGTAAATCGAGT
TTGATTGCTGCTATGGCGAATCATTTGAACTATGATATCTACGATTTGGATCTTACAGAA
GTTCGTAGCAATTCAAATCTAAGGTCGTTGTTACTTGGCATGTCTGGTCGTTCCATACTT
GTGATCGAGGACATTGACTGCAGTATCAAGCTAGAAAACAGAGAAAAGGAGGAAGAAAAG
GAAAATAAGCACAATAGGGTGACACTGTCGGGAATACTTAATTTTCTTGACGGGATTTGG
TCGTGTTGTGGAGAGGAACGGATAATCGTTGTCACTACCAATCACATAGATAAACTAGAT
GCAGCATTGCTCCGGCCGGGTAGAATGGATATGCACATTTACATGTCATATTGCAAGTTA
TCCTCTTTCAAGCAACTGGTTTTCAATTACTTGAGGATTCAGGAACATAAATTGTTTGAT
AAGATTGGACAACTCTTAGAAGCAGTGGAGGTTACTCCTGCAGAAGTTGCAGGAGAACTG
TTAAAAAGCACGAATCCAAATATATCTCTTCAAAGTCTTATTGAATTTCTTCAAAACAAA
ATTGCAGAAAATAAGATGAAAGCTGAGATGGATTTGACATTGCAGAATGAGAAACCAGAG
GAAGAACCAAAGGATACAACAAATTCTGAATCTACACTTGACTCTTCTGAGGATCTCACT
CACGTTGTTAATCTCTAG

Peptide Sequence

PEP ID

XP_016452901.1
PEP Infomation

PREDICTED: AAA-ATPase At3g50940-like [Nicotiana tabacum]
Sequence

MAPELDMANVKAVVSTVASVAATAMLVRSIANDFIPKEFRSYIFDSFPDIFRRFSSQFTV
LIHEFQGPSPNLVFEAVEVYLGTIANSSAKSIRLGKTENDKNLVITMDKDEEIIDVFENI
KVTWRMECRRIESGSQNDEIKDMIAALSSELRCYELSFHKKHKEMVMKSYLPYIMERSKA
TKEESRAIKLYSNFRNWGSDGMNLEHPMTFDTLAMEEEIKNVLIDDLASFVKGKEYYNRI
GKAWKRGYLLYGPPGTGKSSLIAAMANHLNYDIYDLDLTEVRSNSNLRSLLLGMSGRSIL
VIEDIDCSIKLENREKEEEKENKHNRVTLSGILNFLDGIWSCCGEERIIVVTTNHIDKLD
AALLRPGRMDMHIYMSYCKLSSFKQLVFNYLRIQEHKLFDKIGQLLEAVEVTPAEVAGEL
LKSTNPNISLQSLIEFLQNKIAENKMKAEMDLTLQNEKPEEEPKDTTNSESTLDSSEDLT
HVVNL

Transcript Sequence

Gene sequence data has not been registered.